species:   Artha
pid:       MI0010630
parent:    ath-MIR2111a
paralog:   
locus:     3:2854284-2854442
matures:   ['UAAUCUGCAUCCUGAGGUUUA', 'GUCCUCGGGAUGCGGAUUACC']
srr:       SRR9216053
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216053.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216053.cram 3:2854284-2854442

0 out of bounds
2 alignments
2 proper strand
2 stranded perfect matches

                         ***********************                                                            ***********************                            
CGAUGAUGAGUAUUGGUGAGGACCGGGUAAUCUGCAUCCUGAGGUUUAAAGCUUAAUUUACGCAGGAAAUUUGUAUACGCAUAUACGUAUGUGUAUUAGUAUACCUUUUAGUCCUCGGGAUGCGGAUUACCUCGUUCUUACUUACAAUACACGUACUCG
(((..(((.((((((((((((((.((((((((((((((((((((.(((((((.........)).........((((((..((((((....))))))..))))))..))))).)))))))))))))))))))).))))))))...)))))).)))..)))
---------------------------UAAUCUGCAUCCUGAGGUUUA--------------------------------------------------------------------------------------------------------------- l=21 a=0 c
--------------------------------------------------------------------------------------------------------------GUCCUCGGGAUGCGGAUUACC---------------------------- l=21 a=2 c*
--------------------------------------------------------------------------------------------------------------GUCCUCGGGAUGCGGAUUACC---------------------------- l=21 a=2 ma
---------------------------UAAUCUGCAUCCUGAGGUUUA--------------------------------------------------------------------------------------------------------------- l=21 a=0 ma*

--------------------------------------------------------------------------------------------------------------GUCCUCGGGAUGCGGAUUACC---------------------------- l=21 a=2 (c*,ma)

mb-01011
ax-1011111
ku-01
ss-111111111110
fn-011
